HOME INVESTIGATOR RESEARCH MEMBERS

PUBLICATIONS

LINKS
PAPERS

    2008

  1. Chapman R, Kulp Iii JL, Patgiri A, Kallenbach NR, Bracken C, Arora PS. Trapping a Folding Intermediate of the alpha-Helix: Stabilization of the pi-Helix. Biochemistry. 2008 Mar 13. [ABSTRACT]
  2. Zhou C, Min J, Liu Z, Young A, Deshazer H, Gao T, Chang YT, Kallenbach NR. Synthesis and biological evaluation of novel 1,3,5-triazine derivatives as antimicrobial agents. Bioorg Med Chem Lett. 2008 Feb 15;18(4):1308-11. [ABSTRACT]
  3. 2007

  4. Liu J, Zheng Q, Deng Y, Li Q, Kallenbach NR, Lu M. Conformational specificity of the lac repressor coiled-coil tetramerization domain. Biochemistry. 2007 Dec 25;46(51):14951-9 [ABSTRACT]
  5. Chen K, Liu Z, Zhou C, Bracken WC, Kallenbach NR. Spin relaxation enhancement confirms dominance of extended conformations in short alanine peptides. Angew Chem Int Ed Engl. 2007;46(47):9036-9
  6. Liu Z, Young AW, Hu P, Rice AJ, Zhou C, Zhang Y, Kallenbach NR. Tuning the membrane selectivity of antimicrobial peptides by using multivalent design. Chembiochem. 2007 Nov 23;8(17):2063-5
  7. Deng Y, Zheng Q, Liu J, Cheng CS, Kallenbach NR, Lu M.Self-assembly of coiled-coil tetramers in the 1.40 A structure of a leucine-zipper mutant. Protein Sci. 2007 Feb;16(2):323-8 [ABSTRACT]
  8. Liu J, Deng Y, Zheng Q, Cheng CS, Kallenbach NR, Lu M. A parallel coiled-coil tetramer with offset helices. Biochemistry. 2006 Dec 26;45(51):15224-31 [ABSTRACT]
  9. Liu Z, Brady A, Young A, Rasimick B, Chen K, Zhou C, Kallenbach NR. Length effects in antimicrobial peptides of the (RW)n series. Antimicrob Agents Chemother. 2007 Feb;51(2):597-603 [ABSTRACT]
  10. 2006

  11. Liu J, Zheng Q, Deng Y, Cheng CS, Kallenbach NR, Lu M: A seven-helix coiled coil. Proc Natl Acad Sci U S A. 2006 Oct 17;103(42):15457-62 [ABSTRACT]
  12. Liu Z, Deshazer H, Rice A, Chen K, Zhou C, Kallenbach N: Multivalent antimicrobial peptides from a reactive polymer scaffold. J. Med. Chem. 2006, 49:3436-3439 [ABSTRACT]
  13. Shi Z, Chen K, Liu Z, Kallenbach N: Conformation of the backbone in unfolded proteins. Chem. Rev. 2006, 106:1877-1897 [ABSTRACT]
  14. Deng Y, Liu J, Zheng Q, Eliezer D, Kallenbach N, Lu M: PII Antiparallel four-stranded coiled coil specified by a 3-3-1 hydrophobic heptad repeat. Structure 2006, 14:247-255. [ABSTRACT]
  15. Shi Z, Chen K, Liu Z, Sosnick T, Kallenbach N: PII structure in the model peptides for unfolded proteins: Studies on ubiquitin fragments and several alanine-rich peptides containing QQQ, SSS, FFF, and VVV. Proteins 2006, 62:312-321. [ABSTRACT]
  16. 2005

  17. Shi Z, Chen K, Liu Z, Ng, A, Bracken C, Kallenbach N: Polyproline II propensities from GGXGG peptides reveal an anticorrelation with beta-sheet scales. Proc. Natl. Acad. Sci. USA 2005, 102:17964-17968. [ABSTRACT]
  18. Lee-Huang S, Maiorov V, Huang P, Ng A, Lee H, Chang Y, Kallenbach N, Huang P, Chen H: Structural and functional modeling of human lysozyme reveals a unique nonapeptide, HL9, with anti-HIV activity. Biochemistry 2005, 44:4648-4655. [ABSTRACT]
  19. 2004

  20. Chen K, Liu Z, Zhou C, Shi Z, Kallenbach N: Neighbor Effect on PPII Conformation in Alanine Peptides. J. Am. Chem. Soc. 2004, 127:10146-10147. [ABSTRACT]
  21. McColl I, Blanch E, Hecht L, Kallenbach N, Barron L: Vibrational Raman optical activity characterization of poly(L-proline) II helix in alanine oligopeptides. J. Am. Chem. Soc. 2004, 126:5076-5077. [ABSTRACT]
  22. Liu Z, Chen K, Ng A, Shi Z, Woody R, Kallenbach N: Solvent dependence of PII conformation in model alanine peptides. J. Am. Chem. Soc. 2004, 126:15141-15150. [ABSTRACT]
  23. Liu J, Yong W, Deng Y, Kallenbach N, Lu M: Atomic structure of a tryptophan-zipper pentamer. Proc. Natl. Acad. Sci. USA 2004, 101:16156-16161. [ABSTRACT]
  24. Lee-Huang S, Huang P, Maiorov V, Huang P, Ng A, Chang Y, Kallenbach N, Chen H: Structure function mapping of anti-HIV activity of human lysozyme. FASEB J. 2004, 18:C149-C149.
  25. Chen K, Liu Z, Kallenbach N: The polyproline II conformation in short alanine peptides is noncooperative. Proc. Natl. Acad. Sci. USA 2004, 101:15352-15357. [ABSTRACT]
  26. Cao W, Bracken C, Kallenbach N, Lu M: Helix formation and the unfolded state of a 52-residue helical protein. Protein Sci. 2004, 13:177-189. [ABSTRACT]
  27. 2003

  28. Kentsis A, Mezei M, Kallenbach N, Osman R: Conformational thermodynamics of polypeptides in aqueous solution: MC-PHS and hybrid MC-MD REX studies. Biophys. J. 2003, 84:165A-165A.
  29. Ding L, Chen K, Santini P, Shi Z, Kallenbach N: The pentapeptide GGAGG has PII conformation. J. Am. Chem. Soc. 2003, 125:8092-8093. [ABSTRACT]
  30. 2002

  31. Shi Z, Woody R, Kallenbach N: Is polyproline II a major backbone conformation in unfolded proteins? Adv. Protein Sci. 2002, 62:163-240. [ABSTRACT]
  32. Shi Z, Olson C, Rose G, Baldwin R, Kallenbach N: Polyproline II structure in a sequence of seven alanine residues. Proc. Natl. Acad. Sci. USA 2002, 99:9190-9195. [ABSTRACT]
  33. Shi Z, Olson C, Kallenbach N, Sosnick T: D/H amide isotope effect in model alpha-helical peptides. J. Am. Chem. Soc. 2002, 124:13994-13995. [ABSTRACT]
  34. Shi Z, Olson C, Kallenbach N: Cation-pi interaction in model alpha-helical peptides. J. Am. Chem. Soc. 2002, 124:3284-3291. [ABSTRACT]
  35. Shi Z, Olson C, Bell A, Kallenbach N: Non-classical helix-stabilizing interactions: C-H.O H-bonding between Phe and Glu side chains in alpha-helical peptides. Biophys. Chem. 2002, 101:267-279. [ABSTRACT]
  36. Shi Z, Krantz B, Kallenbach N, Sosnick T: Contribution of hydrogen bonding to protein stability estimated from isotope effects. Biochemistry 2002, 41:2120-2129.
  37. Bell A, Xin H, Taudte S, Shi Z, Kallenbach N: Metal-dependent stabilization of an active HMG protein. Protein Eng. 2002, 15:817-825. [ABSTRACT]
  38. 2001

  39. Taudte S, Xin H, Bell A, Kallenbach N: Interactions between HMG boxes. Protein Eng. 2001, 14:1015-1023. [ABSTRACT]
  40. Shi Z, Olson C, Bell A, Kallenbach N: Stabilization of alpha-helix structure by polar side-chain interactions: Complex salt bridges, cation-pi interactions, and C-H center dot center dot center dot O H-bonds. Biopolymers 2001, 60:366-380. [ABSTRACT]
  41. Olson C, Spek E, Shi Z, Vologodskii A, Kallenbach N: Cooperative helix stabilization by complex Arg-Glu salt bridges. Proteins 2001, 44:123-132. [ABSTRACT]
  42. Olson C, Shi Z, Kallenbach N: Polar interactions with aromatic side chains in alpha-helical peptides: Ch center dot center dot center dot O H-bonding and cation-pi interactions. J. Am. Chem. Soc. 2001, 123:6451-6452. [ABSTRACT]
  43. Kallenbach N: Breaking open a protein barrel. Proc. Natl. Acad. Sci. USA 2001, 98:2958-2960. [ABSTRACT]
  44. 2000

  45. Xin H, Taudte S, Kallenbach N, Limbach M, Zitomer R: DNA binding by single HMG box model proteins. Nucleic Acids Res. 2000, 28:4044-4050. [ABSTRACT]
  46. Taudte S, Xin H, Kallenbach N: Alanine mutagenesis of high-mobility-group-protein-1 box B (HMG1-B). Biochem. J. 2000, 347:807-814. [ABSTRACT]
  47. Prior to 2000

    For Publications prior to 2000, please visit PubMed
PATENTS
  1. Kallenbach, N.; Chang, Y-T.; Liu, Z.; Min, J. Triazine compounds, pharmaceutical compositions and methods of using the same. PCT Int. Appl. (2007), filed
  2. Liu, Z.; Kallenbach, N.; Young, A.W.; Zhou, C.; Dendrimer peptides, pharmaceutical compositions and methods of using the same. PCT Int. Appl. (2007), filed
  3. Malamud, Daniel; Abrams, William; Arora, Paramjit; Liu, Zhigang; Kallenbach, Neville. Pharmaceutical compositions comprising antimicrobial or antiviral polypeptides conjugated with biocompatible polymers for treating microbial or viral infection. PCT Int. Appl. (2007), 169pp. CODEN: PIXXD2 WO 2007025178 A2 20070301 CAN 146:294175 AN 2007:226841
  4. Seeman, Nadrian C.; Chen, Junghuei; Kallenbach, Neville R.. Multiply-connected, three-dimensional nucleic acid structures. PCT Int. Appl. (1992), 42 pp. CODEN: PIXXD2 WO 9212164 A1 19920723 CAN 117:146749 AN 1992:546749
  5. Kim, Peter S.; Kallenbach, Neville R.. Antibodies to transition state analogs as catalysts. Eur. Pat. Appl. (1989), 24 pp. CODEN: EPXXDW EP 305870 A2 19890308 CAN 111:211068 AN 1989:611068
  6. Kallenbach, Neville R.; Kim, Peter S. Production of antibody catalysts. Eur. Pat. Appl. (1988), 33 pp. CODEN: EPXXDW EP 251093 A2 19880107 CAN 110:152652 AN 1989:152652
  7. Cornelius, Paul A.; Hochstrasser, Robin M.; Kallenbach, Neville R.; Rubin, Harvey; Todaro, George J. Sterilizing biological media by selective photolysis. Ger. Offen. (1985), 49 pp. CODEN: GWXXBX DE 3505728 A1 19850905 CAN 105:130648 AN 1986:530648