KATHARINE C. COLGATE

 

HIGHLIGHTS

Extensive experience in giving scientific presentations.
Extensive experience in HPLC separations, Mass Spectrometry, Circular Dichroism, Absorption and Fluorescence Spectrometry.
Extensive experience in method development and method validation.
Strong background in biochemical skills.
Strong background in the study of carcinogenesis.
Strong background in clinical trials and data management.

 

EDUCATION

PhD in Biochemistry, New York University, New York, NY            8/2003
MS in Chemistry, New York University, New York, NY                   5/2000
MS in Biology, New York University, New York, NY                       5/1998
BS in Chemistry, Bates College, Lewiston, ME                             5/1996
Westminster School, Simsbury, CT                                                 5/1992

 

      PROFESSIONAL EXPERIENCE

 

Ø       Graduate Research Assistant, New York University, (New York, NY) 1998-present.

DNA Chemistry and Photophysics Laboratory

Synthesis, identification, and characterization of DB[a]P-dG adducts.
Studies of nucleic acid excision repair (NER) of structurally different DNA adducts caused by environmental carcinogens that effect the p53 Gene causing “hotspots” of mutation.

Ø       Graduate Research Assistant, New York University, (New York, NY) 1997-1998.

Laboratory of Neuroplasticity and the Center for Aging

The study of serotonin levels (5HT-1A receptor activity) caused by the S100B protein in the cortex cells of prenatal rat brain, and how these level may contribute to the onset of Alzheimer’s disease.

Ø       Teacher’s Assistant in Chemistry, New York University, (New York, NY) 1997-2000.

Prepared and taught lecture and laboratory classes to under-graduate pre-medical students. 

Ø       Research Study Assistant and Data Manager in the Clinical Trials Department, Memorial Sloan Kettering Cancer Center, (New York, NY) 1996-1997.

In charge of certain clinical trials for experimental cancer fighting drugs for the gastrointestinal service, which included phase II, and III clinical trials.

Ø       Internship in Protein Chemistry, The Cold Spring Harbor Laboratory, (Cold Spring Harbor, NY) Summer 1996.

Learned techniques in peptide synthesis and combinatorial chemistry to identify cancer specific proteins.

Ø       Student Athletic Sports Medicine Trainer, Bates College, (Lewiston, ME) 1992-1996.

Evaluation and care of athletic injuries.

 

      SKILLS

HPLC (Waters 501, 510, and 515 with DAD; Hitachi L-6200A)
UV-VIS (HP 8451A; AVIV 14DS; Agilent 8453; Perkin-Elmer LC-15; Hitachi L4000; Shimadzu SPD-10A)
Circular Dichroism Spectrometer (AVIV 202SF)
Mass Spectrometer (Bruker Daltonics OmniFLEX Maldi Tof)
Fluorescence Spectrometer (Hitachi F-2500; HP series 100; Perkin-Elmer LS-5 and 650S)
Gel electrophoresis (DNA purification and sequencing
Cell culture techniques (HeLa, lymphoblast, and neural cells)
In vivo and in vitro DNA repair assays
Protein extraction from human cells

PROFESSIONAL MEMBERSHIPS

American Chemical Society
The New York Academy of Sciences
American Association for Cancer Research

COMPUTER SKILLS

Proficient in Microsoft Office, Adobe Photoshop, Micro Origin, Phosphor Analyst, Image Quant, ChemDraw, Scifinder, End-Note, Spartan Software for molecular modeling and quantum mechanical calculations, CRDB, Oracle, Internet and World Wide Web connectivity, and other computer packages for chemists in Microsoft windows (98, NT, 2000, XP).

PUBLICATIONS

Huang, Xuanwei; Colgate, Katharine C.; Kolbanovskiy, Aleksandr; Amin, Shantu; Geacintov, Nicholas E. “ Confomational Changes of a Benzo[a]pyrene Diol epoxide-N2-dG Adduct Induced by a 5’-flanking 5-Methyl Substituted Cytosine in a MeCG Double-Stranded Oligonucleotide Sequence Context”, Chemical Research in Toxicology, 15(3), 438-444 (2002).
Muheim, Regula; Bolhalder, Maja; Buterin, Tonko; Colgate, Katharine C.; Kolbanovskiy, Aleksandr; Geacintov, Nicholas E.; and Neigeli, Hanspeter,  “ Modulation of Human Nuclotide Excision Repair by 5-methylcytosines”, to be published in Cancer Research.

 

Presentations and Published Abstracts from Scientific Conferences

Colgate, Katharine C; Huang, Xuanwei; Kolbanovisky, Aleksandr; Amin, Shantu; Geacintov, Nicholas E. “ Molecular spectroscopic analysis of conformational changes induced by 5-MeC Groups adjacent to Benzo[a]pyrene diol epoxide N2-dG Adducts at p53 mutational hot spot 5-MeCG* Oligonucleotide Sequences”. 222nd American Chemical Society National Meeting. August 2001, Chicago, IL.
Huang, Xuanwei; Colgate, Katharine C.; Kolbanovskiy, Aleksandr; Amin, Shantu; Geacintov, Nicholas E. “ Confomational Changes of a Benzo[a]pyrene Diol epoxide-N2-dG Adduct Induced by a 5’-flanking 5-Methyl Substituted Cytosine in a MeCG Double-Stranded Oligonucleotide Sequence Context”. American Association for Cancer Research Conference, March 2002, San Francisco, CA.

Volunteer Experience

Board member of “Street Project”, a New York based non-profit organization for the homeless.
English, Science and Math tutor.  St.Mary’s Hospital, Lewiston, ME. 
Figure Skating Instructor for children and adults, Bates College, Lewiston, ME.1994-1996.

 

Interests and Activities

Sailing, skiing, tennis, golf, yoga and long distance running.
Sailing coach at various Yacht Clubs on the east coast (summers 1993, 1994,1995)
Founder and Captain of the Bates College women’s ice hockey team, varsity cross-country team member.
 
Recent Publications Projects Digital Analysis of

    Gel Images

Instrumentation