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Publications
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| Crosstalk Publications |
Russo, A., Chandramouli, N., Zhang, L., and Deng, H. (2008). Reductive glutaraldehydation of amine groups for identification of protein N-termini. J Proteome Res 7, 4178-4182.
Abstract: In the present work, reductive alkylation of proteins and peptides with glutaraldehyde (reductive glutaraldehydation) is reported. The reaction is highly efficient and forms piperidine at the N-terminus as well
as the side chain of lysine residues. The complete modification of protein amines was achieved by reductive
glutaraldehydation in solution or in the gel in less than 15 min. The glutaraldehyde-modified peptides display an enhanced intensity in mass spectra and show higher retention time in reversed phase chromatography in
comparison to unmodified peptides. Fragmentation of glutaraldehyde-modified proteins and peptides generates a1 fragment ions with enhanced intensity in MS/MS spectra. Thus, a method based on reductive glutaraldehydation and LC-MS/MS analysis has been developed to determine the N-terminal residue of proteins with free N-termini. |
Gyusik Cho, Zhou Chen, and Yihong Li (2008) The Correlation between HIV Infection and Colonization of Cariogenic and Periodontal Pathogens. NYUCD Student Research Day Poster, July 25, 2008 |
Patra Ong, Patricia Corby (2008) Crosstalk Among Oral and Gastrointestinal Soluble Innate Factors, HIV, and Microbes – Clinical Core. NYUCD Student Research Day Poster, July 25, 2008 |
| Nossa CW, Oberdorf WE, Yang L, Aas JA, Paster BJ, DeSantis TZ,
Brodie E, Lee P, Malamud D, Poles M, Pei Z. Design of 16S rRNA
gene primers for 454-pyrosequencing of human foregut microbiome. World
Journal of Gastroenterology. 2010; 16: 4135-4144. PMID: 20806429;
PMCID: PMC2932916 |
| Liu G, Saxena D, Deng H, Norman RG, Chen Z, Abrams WR, Malamud D, Li
Y.. Effect
of protease inhibitors on the quantitative and qualitative assessment
of oral microorganisms. FEMS Microbiol Lett 2010. 312;2010:63-70. NIHMS229846 PMID:
20831596 |
| Dun Hong, Hai-xiao Chen, Hai-qiang Yu, Haiteng Deng*, and Renshan Ge*,
Morphological and proteomic analysis of early stage of osteoblast differentiation
in osteoblastic progenitor cells, Experimental Cell Research, 2010, 316,
2291-2300. |
| D. Hong, H.-X. Chen, H.-Q. Yu, C. Wang and H.-T. Deng*, and Renshan Ge*,
Quantitative proteomic analysis of dexamethasone-induced effects on osteoblast
differentiation, proliferation, and apoptosis in MC3T3-E1 cells using SILAC;
Osteoporosis International, Online First™, 9 November 2010 |
| Pushalkar, S., Mane, S., Ji, X., Li, Y., Evans, C., Crasta, O., Morse,
D., Meagher, R., Singh, A., Saxena, D .Microbial Diversity in Salvia
of Oral Squamous Cell Carcinoma. FEMS Immunology and Medical Microbiology
2010 DOI: 10.1111/j.1574-695X.2010.00773.x |
| Malamud D, Abrams WR, Barber CA, Weissman D, Rehtanz M and Golub E (2011).
Antiviral activities in human saliva. Adv Dent Res 23: 34-7. |
2011 IADR Abstracts:
M. Dalvi, W. Abrams, C. Barber, R. Norman, and D. Malamud. Salivary
and Plasma Cytokine Alterations in HIV Infection. IADR/AADR Annual Meeting.
2011 (PDF)
J Phelan et al. Clinical Core development: Oral and Gastrointestinal
Innate Factors Associated with HIV and Microbes. IADR/AADR Annual Meeting.
2011 (PDF)
N. Zhang, D. Malamud, and H. Deng. Analysis of Changes of Salivary
Proteins in HIV-1 Seropositive. DR/AADR Annual Meeting.
2011 (PDF) |
2012 AIDS Meetubg
D. Saxena, Y. Li, A. Devotta, Z. Chen, W. Abrams, R. Norman, D. Malamud (2012) Oral Microbiome Associated with HIV /AIDS. XIX International AIDS Conference (AIDS 2012), Washington, D.C., 22-27 July 2012 Abstract number: 12428 (PDF) |
| G. Liu, D. Saxena, Z. Chen, R.G. Norman, J. A. Phelan, M. Laverty, G.S. Fisch, P.M. Corby, W.R. Abrams, D. Malamud, and Y. Li (2012) HIV Infection Affects Streptococcus mutans Levels, but Not Genotypes. J Dent Res X(X):xx-xx, XXXX (DOI: 10.1177/0022034512454298). (PDF) |
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