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Crosstalk Publications

Barber, Cheryl; Weissman, Drew; Barnhart, Kurt; Dalvi, Minal; Abrams, William R; Malamud, Daniel. (2013) An electrochemiluminescence assay for gp340 (DMBT1). Analytical biochemistry. 2013 Sep 1; 440 (1) :78-80
Zhang, Nawei; Zhang, Zhenyu; Feng, Shan; Wang, Qingtao; Malamud, Daniel; Deng, Haiteng. Quantitative analysis of differentially expressed saliva proteins in human immunodeficiency virus type 1 (HIV-1) infected individuals. Analytica chimica acta. 2013 Apr 24; 774:61-6.
Liu, G; Saxena, D; Chen, Z; Norman, R G; Phelan, J A; Laverty, M; Fisch, G S; Corby, P M; Abrams, W; Malamud, D; Li, Y. HIV infection affects Streptococcus mutans levels, but not genotypes., Journal of dental research. 2012 Sep; 91 (9):834-40.
Nassry, David D; Phelan, Joan A; Ghookasian, Miganoush; Barber, Cheryl A; Norman, Robert G; Lloyd, Madeleine M; Schenkel, Andrew; Malamud, Daniel; Abrams, William R. Patient and provider acceptance of oral HIV screening in a dental school setting., Journal of dental education. 2012 Sep; 76 (9):1150-5.
Pei, Anna; Li, Hongru; Oberdorf, William E; Alekseyenko, Alexander V; Parsons, Tamasha; Yang, Liying; Gerz, Erika A; Lee, Peng; Xiang, Charlie; Nossa, Carlos W; Pei, Zhiheng. Diversity of 5S rRNA genes within individual prokaryotic genomes., FEMS microbiology letters. 2012 Oct; 335:11-8.
Saxena, Deepak; Li, Yihong; Yang, Liying; Pei, Zhiheng; Poles, Michael; Abrams, William R; Malamud, Daniel. Human microbiome and HIV/AIDS. Current HIV/AIDS reports. 2012 Mar 9:44-51.
Yang, Liying; Francois, Fritz; Pei, Zhiheng, Molecular pathways: pathogenesis and clinical implications of microbiome alteration in esophagitis and Barrett esophagus., Clinical cancer research : an official journal of the American Association for Cancer Research. 2012 Apr 15; 18:2138-44.
Feng, Shan; Tian, Enbing; Zhang, Lei; Wang, Qingtao; Deng, Haiteng. Development of the Fc-III tagged protein expression system for protein purification and detection. PloS one. 2012; 7 (8):e44208.
Francois, F., Khan, A., Yang, L., Serouya, S., Pei, Z. (2012) Molecular Predictors in Neoplastic Progression of Barrett’s Esophagus. In Gastroesophageal Reflux Disease, Mauro Bortolotti (Ed.), ISBN: 978-953-51-0314-1, InTech, 2012, page 22-60. [DOI: 10.5772/31574].
Giannobile, W V; McDevitt, J T; Niedbala, R S; Malamud, D. Translational and clinical applications of salivary diagnostics. Advances in dental research. 2011 Oct; 23 (4) :375-80.
Chen, Yuxuan; Zhang, Does transthyretin function as one of contributors for preeclampsia?, Medical hypotheses. 2011 Jan; 76 (1) :8-10.
Malamud, Daniel. Saliva as a diagnostic fluid., Dental clinics of North America. 2011 Jan; 55 (1):159-78.
Liu, C; Zhang, N; Yu, H; Chen, Y; Liang, Y; Deng, H; Zhang, Z,Proteomic analysis of human serum for finding pathogenic factors and potential biomarkers in preeclampsia., Placenta. 2011 Feb; 32 (2):168-74.
Pushalkar, Smruti; Mane, Shrinivasrao P; Ji, Xiaojie; Li, Yihong; Evans, Clive; Crasta, Oswald R; Morse, Douglas; Meagher, Robert; Singh, Anup; Saxena, Deepak. Microbial diversity in saliva of oral squamous cell carcinoma., FEMS immunology and medical microbiology. 2011 Apr; 61 (3):269-77.
Malamud, D; Abrams, W R; Barber, C A; Weissman, D; Rehtanz, M; Golub, E, , Antiviral activities in human saliva., Advances in dental research. 2011 Apr; 23 (1):34-7.
Johnson NW, Malamud D, Reznik D, Speicher DJ, Phelan J. (2011) Mucosal fluids and biomarkers of clinical disease: workshop 3B. Advances in dental research. 23(1): 137-41 [doi: 10.1177/0022034511400078. PMID: 21441495].
Nossa, Carlos W; Oberdorf, William E; Yang, Liying; Aas, Jorn A; Paster, Bruce J; Desantis, Todd Z; Brodie, Eoin L; Malamud, Daniel; Poles, Michael A; Pei, Zhiheng. Design of 16S rRNA gene primers for 454 pyrosequencing of the human foregut microbiome. World journal of gastroenterology: WJG. 2010 Sep 7; 16 (33):4135-44 [PMID: 20806429].
Liu, Gaoxia; Saxena, Deepak; Deng, Haiteng; Norman, Robert G; Chen, Zhou; Abrams, Williams R; Malamud, Daniel; Li, Yihong. Effect of protease inhibitors on the quantitative and qualitative assessment of oral microorganisms., FEMS microbiology letters. 2010 Nov; 312 (1) :63-70.
Malamud, Daniel, Wahl, Sharon M. The mouth: a gateway or a trap for HIV?, AIDS (London, England). 2010 Jan 2; 24 (1):5-16.
Yan, W., R. Apweiler, B. M. Balgley, P. Boontheung, J. L. Bundy, B. J. Cargile, S. Cole, X. Fang, M. Gonzalez-Begne, T. J. Griffin, F. Hagen, S. Hu, L. E. Wolinsky, C. S. Lee, D. Malamud, J. E. Melvin, R. Menon, M. Mueller, R. Qiao, N. L. Rhodus, J. R. Sevinsky, D. States, J. L. Stephenson, S. Than, J. R. Yates, W. Yu, H. Xie, Y. Xie, G. S. Omenn, J. A. Loo and D. T. Wong (2009). Systematic comparison of the human saliva and plasma proteomes. Proteomics Clin Appl 3(1): 116-134 [PMCID: PMC2773554].
Russo, Allison; Chandramouli, Nagarajan; Zhang, Linqi; Deng, Haiteng. Reductive glutaraldehydation of amine groups for identification of protein N-termini. Journal of proteome research. 2008 Sep; 7 (9):4178-82.

In Preparation/Submitted
Joan A. Phelan, William R. Abrams, Robert G. Norman, Yihong Li, Maura Laverty, Patricia M. Corby, Jason Nembhard, Dinah Neri, Cheryl A. Barber, Judith A. Aberg, Gene S. Fisch, Michael A. Poles, Daniel Malamud. Crosstalk among oral and gastrointestinal soluble innate factors, HIV, and microbes (Manuscript in preparation).
Yang, L., Nossa, C.W., Oberdorf, W.E., Poles, M., Pei, Z. Effect of HIV infection and HAART therapy on gut microbiome. (2012) (Manuscript in preparation).